Stephane Audic: search on Z-Library

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1

MicRhoDE: a curated database for the analysis of microbial rhodopsin diversity and evolution

Boeuf, Dominique, Audic, Stéphane, Brillet-Guéguen, Loraine, Caron, Christophe, Jeanthon, Christian

Journal:

Year:

2015

Language:

english

File:

PDF, 1.04 MB

english, 2015

2

Morphology and functional properties of commercial polyhydroxyalkanoates: A comprehensive and comparative study

Yves-Marie Corre, Stéphane Bruzaud, Jean-Luc Audic, Yves Grohens

Journal:

Polymer Testing

Year:

2012

Language:

english

File:

PDF, 1.02 MB

english, 2012

3

Visualizing the competitive recognition of TATA-boxes in vertebrate promoters

Stéphane Audic, Jean-Michel Claverie

Journal:

Trends in Genetics

Year:

1998

Language:

english

File:

PDF, 282 KB

english, 1998

4

Mimivirus and the emerging concept of “giant” virus

Jean-Michel Claverie, Hiroyuki Ogata, Stéphane Audic, Chantal Abergel, Karsten Suhre, Pierre-Edouard Fournier

Journal:

Year:

2006

Language:

english

File:

PDF, 1018 KB

english, 2006

5

Testing ecological theories with sequence similarity networks: marine ciliates exhibit similar geographic dispersal patterns as multicellular organisms

Forster, Dominik, Bittner, Lucie, Karkar, Slim, Dunthorn, Micah, Romac, Sarah, Audic, Stéphane, Lopez, Philippe, Stoeck, Thorsten, Bapteste, Eric

Journal:

Year:

2015

Language:

english

File:

PDF, 1.14 MB

english, 2015

6

SAmBA: An interactive software for optimizing the design of biological macromolecules crystallization experiments

Stéphane Audic, Fabrice Lopez, Jean-Michel Claverie, Olivier Poirot, Chantal Abergel

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

1997

Language:

english

File:

PDF, 146 KB

english, 1997

7

Detection of eukaryotic promoters using Markov transition matrices

Stéphane Audic, Jean-Michel Claverie

Journal:

Computers & Chemistry

Year:

1997

Language:

english

File:

PDF, 484 KB

english, 1997

8

The genome sequence ofBrucella pinnipedialisB2/94 sheds light on the evolutionary history of the genusBrucella

Stéphane Audic, Magali Lescot, Jean-Michel Claverie, Axel Cloeckaert, Michel S Zygmunt

Journal:

BMC Evolutionary Biology

Year:

2011

Language:

english

File:

PDF, 312 KB

english, 2011

9

Impact of the tail and mutations G131V and M129V on prion protein flexibility

Sébastien Santini, Jean-Baptiste Claude, Stéphane Audic, Philippe Derreumaux

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2003

Language:

english

File:

PDF, 445 KB

english, 2003

10

Some lessons from Rickettsia genomics

Patricia Renesto, Hiroyuki Ogata, Stéphane Audic, Jean-Michel Claverie, Didier Raoult

Journal:

FEMS Microbiology Reviews

Year:

2005

Language:

english

File:

PDF, 494 KB

english, 2005

11

BLAST-EXPLORER helps you building datasets for phylogenetic analysis

Alexis Dereeper, Stephane Audic, Jean-Michel Claverie, Guillaume Blanc

Journal:

BMC Evolutionary Biology

Year:

2010

Language:

english

File:

PDF, 914 KB

english, 2010

12

Analysis of theRickettsia africaegenome reveals that virulence acquisition inRickettsiaspecies may be explained by genome reduction

Pierre-Edouard Fournier, Khalid El Karkouri, Quentin Leroy, Catherine Robert, Bernadette Giumelli, Patricia Renesto, Cristina Socolovschi, Philippe Parola, Stéphane Audic, Didier Raoult

Journal:

Year:

2009

Language:

english

File:

PDF, 904 KB

english, 2009

13

Brucella microti: the genome sequence of an emerging pathogen

Stéphane Audic, Magali Lescot, Jean-Michel Claverie, Holger C Scholz

Journal:

Year:

2009

Language:

english

File:

PDF, 486 KB

english, 2009

14

Diversity patterns of uncultured Haptophytes unravelled by pyrosequencing in Naples Bay

Bittner, Lucie, Gobet, Angélique, Audic, Stéphane, Romac, Sarah, Egge, Elianne S., Santini, Sébastien, Ogata, Hiroyuki, Probert, Ian, Edvardsen, Bente, de Vargas, Colomban

Journal:

Molecular Ecology

Year:

2013

Language:

english

File:

PDF, 1.92 MB

english, 2013

15

Heart-specific genes revealed by expressed sequence tag (EST) sampling

Karine Mégy, Stéphane Audic, Jean-Michel Claverie

Journal:

Year:

2002

Language:

english

File:

PDF, 124 KB

english, 2002

16

Heart Specific Genes Revealed by EST Sampling

Karine Mégy, Stéphane Audic, Jean-Michel Claverie

Journal:

Year:

2002

Language:

english

File:

PDF, 71 KB

english, 2002

17

Positional clustering of differentially expressed genes on human chromosomes 20, 21 and 22

Karine Mégy, Stéphane Audic, Jean-Michel Claverie

Journal:

Year:

2003

Language:

english

File:

PDF, 118 KB

english, 2003

18

Patterns of Rare and Abundant Marine Microbial Eukaryotes

Logares, Ramiro, Audic, Stéphane, Bass, David, Bittner, Lucie, Boutte, Christophe, Christen, Richard, Claverie, Jean-Michel, Decelle, Johan, Dolan, John R., Dunthorn, Micah, Edvardsen, Bente, Gobet, A

Journal:

Current Biology

Year:

2014

Language:

english

File:

PDF, 1.85 MB

english, 2014

19

Self-Identification of Protein-Coding Regions in Microbial Genomes

Stephane Audic and Jean-Michel Claverie

Journal:

Proceedings of the National Academy of Sciences

Year:

1998

Language:

english

File:

PDF, 1.06 MB

english, 1998

20

Exploring the uncultured microeukaryote majority in the oceans: reevaluation of ribogroups within stramenopiles

Massana, Ramon, del Campo, Javier, Sieracki, Michael E, Audic, Stéphane, Logares, Ramiro

Journal:

The ISME Journal

Year:

2014

Language:

english

File:

PDF, 904 KB

english, 2014

21

Effect of Ozonation on Activated Sludge Solubilization and Mineralization

Déléris, Stéphane, Paul, Etienne, Audic, Jean Marc, Roustan, Michel, Debellefontaine, Hubert

Journal:

Ozone Science & Engineering

Year:

2000

Language:

english

File:

PDF, 683 KB

english, 2000

22

Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing

Logares, Ramiro, Audic, Stephane, Santini, Sebastien, Pernice, Massimo C, de Vargas, Colomban, Massana, Ramon

Journal:

The ISME Journal

Year:

2012

Language:

english

File:

PDF, 599 KB

english, 2012

23

Diverse molecular signatures for ribosomally ‘active’ Perkinsea in marine sediments

Chambouvet, Aurélie, Berney, Cédric, Romac, Sarah, Audic, Stéphane, Maguire, Finlay, De Vargas, Colomban, Richards, Thomas A

Journal:

BMC Microbiology

Year:

2014

Language:

english

File:

PDF, 1.53 MB

english, 2014

24

The statistical significance of nucleotide position-weight matrix matches

Claverie, Jean-Michel, Audic, Stéphane

Journal:

Year:

1996

Language:

english

File:

PDF, 659 KB

english, 1996

25

Comparative Genomics of Multidrug Resistance in Acinetobacter baumannii

Fournier, Pierre-Edouard, Vallenet, David, Barbe, Valérie, Audic, Stéphane, Ogata, Hiroyuki, Poirel, Laurent, Richet, Hervé, Robert, Catherine, Mangenot, Sophie, Abergel, Chantal, Nordmann, Patrice, W

Journal:

Year:

2006

Language:

english

File:

PDF, 331 KB

english, 2006

26

454 Pyrosequencing to Describe Microbial Eukaryotic Community Composition, Diversity and Relative Abundance: A Test for Marine Haptophytes

Egge, Elianne, Bittner, Lucie, Andersen, Tom, Audic, Stéphane, de Vargas, Colomban, Edvardsen, Bente, Lin, Senjie

Journal:

Year:

2013

Language:

english

File:

PDF, 813 KB

english, 2013

27

Reductive Genome Evolution from the Mother of Rickettsia

Blanc, Guillaume, Ogata, Hiroyuki, Robert, Catherine, Audic, Stéphane, Suhre, Karsten, Vestris, Guy, Claverie, Jean-Michel, Raoult, Didier

Journal:

Year:

2007

Language:

english

File:

PDF, 528 KB

english, 2007

28

Genome-Wide Analysis of Heteroduplex DNA in Mismatch Repair–Deficient Yeast Cells Reveals Novel Properties of Meiotic Recombination Pathways

Martini, Emmanuelle, Borde, Valérie, Legendre, Matthieu, Audic, Stéphane, Regnault, Béatrice, Soubigou, Guillaume, Dujon, Bernard, Llorente, Bertrand, Lichten, Michael

Journal:

Year:

2011

Language:

english

File:

PDF, 940 KB

english, 2011

29

Genome Sequence of Rickettsia bellii Illuminates the Role of Amoebae in Gene Exchanges between Intracellular Pathogens

Ogata, Hiroyuki, La Scola, Bernard, Audic, Stéphane, Renesto, Patricia, Blanc, Guillaume, Robert, Catherine, Fournier, Pierre-Edouard, Claverie, Jean-Michel, Raoult, Didier

Journal:

Year:

2006

Language:

english

File:

PDF, 407 KB

english, 2006

30

Life-cycle modification in open oceans accounts for genome variability in a cosmopolitan phytoplankton

von Dassow, Peter, John, Uwe, Ogata, Hiroyuki, Probert, Ian, Bendif, El Mahdi, Kegel, Jessica U, Audic, Stéphane, Wincker, Patrick, Da Silva, Corinne, Claverie, Jean-Michel, Doney, Scott, Glover, Davi

Journal:

The ISME Journal

Year:

2015

Language:

english

File:

PDF, 2.16 MB

english, 2015

31

The Genome Sequence of Rickettsia felis Identifies the First Putative Conjugative Plasmid in an Obligate Intracellular Parasite

Ogata, Hiroyuki, Renesto, Patricia, Audic, Stéphane, Robert, Catherine, Blanc, Guillaume, Fournier, Pierre-Edouard, Parinello, Hugues, Claverie, Jean-Michel, Raoult, Didier

Journal:

Year:

2005

Language:

english

File:

PDF, 365 KB

english, 2005

32

The Genome of Borrelia recurrentis, the Agent of Deadly Louse-Borne Relapsing Fever, Is a Degraded Subset of Tick-Borne Borrelia duttonii

Lescot, Magali, Audic, Stéphane, Robert, Catherine, Nguyen, Thi Tien, Blanc, Guillaume, Cutler, Sally J., Wincker, Patrick, Couloux, Arnaud, Claverie, Jean-Michel, Raoult, Didier, Drancourt, Michel, R

Journal:

Year:

2008

Language:

english

File:

PDF, 463 KB

english, 2008

33

Genome Analysis of Minibacterium massiliensis Highlights the Convergent Evolution of Water-Living Bacteria

Audic, Stéphane, Robert, Catherine, Campagna, Bernard, Parinello, Hugues, Claverie, Jean-Michel, Raoult, Didier, Drancourt, Michel

Journal:

Year:

2007

Language:

english

File:

PDF, 3.04 MB

english, 2007

34

CBOL Protist Working Group: Barcoding Eukaryotic Richness beyond the Animal, Plant, and Fungal Kingdoms

Pawlowski, Jan, Audic, Stéphane, Adl, Sina, Bass, David, Belbahri, Lassaâd, Berney, Cédric, Bowser, Samuel S., Cepicka, Ivan, Decelle, Johan, Dunthorn, Micah, Fiore-Donno, Anna Maria, Gile, Gillian H.

Journal:

Year:

2012

Language:

english

File:

PDF, 385 KB

english, 2012

35

Rapid and qualitative fluorescence-based method for the assessment of PHA production in marine bacteria during batch culture

Elain, Anne, Le Fellic, Magali, Corre, Yves-Marie, Le Grand, Adélaïde, Le Tilly, Véronique, Audic, Jean-Luc, Bruzaud, Stéphane

Journal:

World Journal of Microbiology and Biotechnology

Year:

2015

Language:

english

File:

PDF, 1.20 MB

english, 2015

36

Global distribution and vertical patterns of a prymnesiophyte–cyanobacteria obligate symbiosis

Cabello, Ana M, Cornejo-Castillo, Francisco M, Raho, Nicolas, Blasco, Dolors, Vidal, Montserrat, Audic, Stéphane, de Vargas, Colomban, Latasa, Mikel, Acinas, Silvia G, Massana, Ramon

Journal:

The ISME Journal

Year:

2015

Language:

english

File:

PDF, 2.62 MB

english, 2015

37

Valorisation of local agro-industrial processing waters as growth media for polyhydroxyalkanoates (PHA) production

Elain, Anne, Le Grand, Adélaïde, Corre, Yves-Marie, Le Fellic, Magali, Hachet, Nicolas, Le Tilly, Véronique, Loulergue, Patrick, Audic, Jean-Luc, Bruzaud, Stéphane

Journal:

Industrial Crops and Products

Year:

2016

Language:

english

File:

PDF, 517 KB

english, 2016

38

Recent advances in computational genomics

Claverie, Jean-Michel, Abergel, Chantal, Audic, Stéphane, Ogata, Hiroyuki

Journal:

Pharmacogenomics

Year:

2001

Language:

english

File:

PDF, 80 KB

english, 2001

39

The symbiotic life of Symbiodinium in the open ocean within a new species of calcifying ciliate (Tiarina sp.)

Mordret, Solenn, Romac, Sarah, Henry, Nicolas, Colin, Sébastien, Carmichael, Margaux, Berney, Cédric, Audic, Stéphane, Richter, Daniel J, Pochon, Xavier, de Vargas, Colomban, Decelle, Johan

Journal:

The ISME Journal

Year:

2015

Language:

english

File:

PDF, 3.35 MB

english, 2015

40

Plankton networks driving carbon export in the oligotrophic ocean

Guidi, Lionel, Chaffron, Samuel, Bittner, Lucie, Eveillard, Damien, Larhlimi, Abdelhalim, Roux, Simon, Darzi, Youssef, Audic, Stephane, Berline, Léo, Brum, Jennifer, Coelho, Luis Pedro, Espinoza, Juli

Journal:

Year:

2016

Language:

english

File:

PDF, 28.22 MB

english, 2016

41

Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms

Ichinomiya, Mutsuo, dos Santos, Adriana Lopes, Gourvil, Priscillia, Yoshikawa, Shinya, Kamiya, Mitsunobu, Ohki, Kaori, Audic, Stéphane, de Vargas, Colomban, Noël, Mary-Hélène, Vaulot, Daniel, Kuwata,

Journal:

The ISME Journal

Year:

2016

Language:

english

File:

PDF, 1.98 MB

english, 2016

42

Electron beam radiation effects on properties and ecotoxicity of PHBV/PLA blends in presence of organo-modified montmorillonite

Zembouai, Idris, Kaci, Mustapha, Bruzaud, Stéphane, Pillin, Isabelle, Audic, Jean-Luc, Shayanfar, Shima, Pillai, Suresh D.

Journal:

Polymer Degradation and Stability

Year:

2016

Language:

english

File:

PDF, 1.86 MB

english, 2016

43

Insights into global diatom distribution and diversity in the world’s ocean

Malviya, Shruti, Scalco, Eleonora, Audic, Stéphane, Vincent, Flora, Veluchamy, Alaguraj, Poulain, Julie, Wincker, Patrick, Iudicone, Daniele, de Vargas, Colomban, Bittner, Lucie, Zingone, Adriana, Bow

Journal:

Proceedings of the National Academy of Sciences

Year:

2016

Language:

english

File:

PDF, 1.65 MB

english, 2016

44

Benthic protists: the under-charted majority

Forster, Dominik, Dunthorn, Micah, Mahé, Fréderic, Dolan, John R., Audic, Stéphane, Bass, David, Bittner, Lucie, Boutte, Christophe, Christen, Richard, Claverie, Jean-Michel, Decelle, Johan, Edvardsen

Journal:

FEMS Microbiology Ecology

Year:

2016

Language:

english

File:

PDF, 1.07 MB

english, 2016

45

Deep sequencing of amplified P rasinovirus and host green algal genes from an Indian Ocean transect reveals interacting trophic dependencies and new genotypes

Clerissi, Camille, Desdevises, Yves, Romac, Sarah, Audic, Stéphane, de Vargas, Colomban, Acinas, Silvia G, Casotti, Raffaella, Poulain, Julie, Wincker, Patrick, Hingamp, Pascal, Ogata, Hiroyuki, Grims

Journal:

Environmental Microbiology Reports

Year:

2015

Language:

english

File:

PDF, 716 KB

english, 2015

46

Global patterns of pelagic dinoflagellate diversity across protist size classes unveiled by metabarcoding

Le Bescot, Noan, Mahé, Frédéric, Audic, Stéphane, Dimier, Céline, Garet, Marie-José, Poulain, Julie, Wincker, Patrick, de Vargas, Colomban, Siano, Raffaele

Journal:

Environmental Microbiology

Year:

2016

Language:

english

File:

PDF, 861 KB

english, 2016

47

PhytoREF: a reference database of the plastidial 16S rRNA gene of photosynthetic eukaryotes with curated taxonomy

Decelle, Johan, Romac, Sarah, Stern, Rowena F., Bendif, El Mahdi, Zingone, Adriana, Audic, Stéphane, Guiry, Michael D., Guillou, Laure, Tessier, Désiré, Le Gall, Florence, Gourvil, Priscillia, Dos San

Journal:

Molecular Ecology Resources

Year:

2015

Language:

english

File:

PDF, 740 KB

english, 2015

48

Marine protist diversity in European coastal waters and sediments as revealed by high-throughput sequencing

Massana, Ramon, Gobet, Angélique, Audic, Stéphane, Bass, David, Bittner, Lucie, Boutte, Christophe, Chambouvet, Aurélie, Christen, Richard, Claverie, Jean-Michel, Decelle, Johan, Dolan, John R., Dunth

Journal:

Environmental Microbiology

Year:

2015

Language:

english

File:

PDF, 1.60 MB

english, 2015

49

PFR 2 : a curated database of planktonic foraminifera 18S ribosomal DNA as a resource for studies of plankton ecology, biogeography and evolution

Morard, Raphaël, Darling, Kate F., Mahé, Frédéric, Audic, Stéphane, Ujiié, Yurika, Weiner, Agnes K. M., André, Aurore, Seears, Heidi A., Wade, Christopher M., Quillévéré, Frédéric, Douady, Christophe

Journal:

Molecular Ecology Resources

Year:

2015

Language:

english

File:

PDF, 1.71 MB

english, 2015

50

Robust identification of Ptbp1-dependent splicing events by a junction-centric approach in Xenopus laevis

Noiret, Maud, Méreau, Agnès, Angrand, Gaëlle, Bervas, Marion, Gautier-Courteille, Carole, Legagneux, Vincent, Deschamps, Stéphane, Lerivray, Hubert, Viet, Justine, Hardy, Serge, Paillard, Luc, Audic,

Journal:

Developmental Biology

Year:

2016

Language:

english

File:

PDF, 600 KB

english, 2016

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